Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKRIKPNKKRELLKAKGINWKDVRLSQTLQEVASPKKKAPEAPKAVDLLEGLTANKQDVLKEAGLVSLEAFAKVSEADVLALKGIGPAAIKQL----VDNGVVFAK
1Z3E Chain:B ((9-69))
--------------------------------------------MTIEEL-DLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVKAKLEELGLGLR-
General information:
TITO was launched using:
RESULT:
Template:
1Z3E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37486 for 353 contacts (-106.2/contact) +
2D Compatibility (PS) -6154 + (NN) -1040 + (LL) 3268
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -46362.0 ( -131.34 by residue)
QMean score : 0.741
(partial model without unconserved sides chains):
PDB file :
Tito_1Z3E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z3E-query.scw
PDB file :
Tito_Scwrl_1Z3E.pdb
: