Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANKQDLIAKVAEATELTKKDSAAAVDAVFAAVADYLAEGEKVQLIGFGNFEVRERAARKGRNPQTGAEIEIAASKVPAFKAGKALKDAVK
1B8Z Chain:A ((2-90))
--NKKELIDRVAKKAGAKKKDVKLILDTILETITEALAKGEKVQIVGFGSFEV-----------------------VPKFKPGKALKEKVK
General information:
TITO was launched using:
RESULT:
Template:
1B8Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11483 for 351 contacts (-32.7/contact) +
2D Compatibility (PS) -7158 + (NN) -370 + (LL) 1900
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -25211.0 ( -71.83 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_1B8Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B8Z-query.scw
PDB file :
Tito_Scwrl_1B8Z.pdb
: