Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEIAVLIIAIAFVVLVLGILFVLKKVSETIEETKQTIKVLTSDVNVTLYQTNEILAKANVLVDDVNGKVSTIDPLFVAIADLSESVSDLNLQARHIGQKASSATSSVTKAGSALAIGKAASKIFRKKGDKK
4XGU Chain:A ((277-334))
--------------------------------------------VNALLTQIDRIRRRDNVLILCTSNLESTLDKALVDRADIVKNVGQPSDFARYSMLKSSIMELARIGVVIDNEVHTDYWPQDICDTKAP
General information:
TITO was launched using:
RESULT:
Template:
4XGU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6827 for 242 contacts (-28.2/contact) +
2D Compatibility (PS) -6079 + (NN) 306 + (LL) 5632
1D Compatibility (HY) -400 + (ID) 950
Total energy: -8318.0 ( -34.37 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_4XGU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XGU-query.scw
PDB file :
Tito_Scwrl_4XGU.pdb
: