Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKNSTLTKLTRVAILSALCVVLRYAFAPLPNIQPITAIFLITVVLFDLKEGVATVTITMLVSSFLMGFGPWVFLQIISFTLILCLWKFLIYPLTKAVCFGKITEVVLQTFFAGGLGVVYGVIIDTCFAWLYHMPWWTYVLAGLSFNMAHALSTCLFYPLLLPILRRFRNEKIH |
2WW9 Chain:B ((60-75)) | --------------AVGIIGYAIKLIHIPI------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2WW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -4809 for 55 contacts (-87.4/contact) +
2D Compatibility (PS) -1690 + (NN) -1710 + (LL) 14884
1D Compatibility (HY) -800 + (ID) 50
Total energy: 5825.0 ( 105.91 by residue)
QMean score : -0.259
|
|
|