Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKPFIAGNWKMNKNPEEAKAFIEAVASKLPSSELVEAGIAAPALTLSTVLEAAKGSELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQVSSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK
1BTM Chain:A ((1-247))
--RKPIIAGNWKMHKTLAEAVQFVEDVKGHVPPADEVISVVCAPFLFLDRLVQAADGTDLKIGAQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFLAQQQIDGPLVGGASLEPASFLQLVEAGR
General information:
TITO was launched using:
RESULT:
Template:
1BTM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109360 for 2175 contacts (-50.3/contact) +
2D Compatibility (PS) -27180 + (NN) -14916 + (LL) 180
1D Compatibility (HY) -24000 + (ID) 6650
Total energy: -181926.0 ( -83.64 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_1BTM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BTM-query.scw
PDB file :
Tito_Scwrl_1BTM.pdb
: