Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIILQGNKIERSFSGDVLFDNINIQVDQRDRIALVGRNGAGKSTLLKILVGEETPTKGEINKKRDLSLSYLAQDSRFQSENTIFQEMLQVFDSLREVEKRL----RELELQMGQVSGSDLEQLMKTYDILSEEFREKGGFTYESDIKAILNGFKFNSDMWEMPISELSGGQNTRLALAKMLLEKPELLVLDEPTNHLDID---TIAWLENYLVNYQGALIIVSHDRYFLDKVATVTYDLTTHSLDRYVGNYSKFMDLKAEKIATEEKNFEKQQKEIAKLEDFVQRNIVRASTTKRAQARRKQLEKMERLDKPNVEQKSANMTFHAGKVSGNVVLTLENAAIGYEGVSLSELIDLDVKKFDAIAIVGPNGIGKSTLIKSLVG-QIPFIKGEAKLGANVETGYYDQSQSNLTKTNTVLDELWNAFSTTP------EVEIRNRLGAFLFSGDDVKKLVSMLSGGERARLLLAKLSMENNNFLILDEPTNHLDIDSKEVLENALIEF----DGTLLFVSHDRYFINRVATKVLEISDKGSTLYLGDYDYYLTKKAELEELARLNEEEVSASKTEIDVTSDYETQKANQKEFRKITRRIAEIEVRLEVLENNENNINGLMLETNDIGKLSDLQKELESIQEEQLLLMEEWENLNMRLDL |
| 3BK7 Chain:A ((120-543)) | -------------------------------VGIVGPNGTGKTTAVKILAGQLIPNLCEDNDSWDNVIRAFRGN-----------ELQNYFERLKNGEIRPVVKPQYVDLLPKAVKGK-VRELLKKVD-------EVGKFEEVVKELELEN-------VLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVI-----HVVYGEPGVYGIFSKPKGTRNGINEFLQGYLKDENVRFRPY---EIRFTKLSERVDVERETLVEYPRLVKD----------------YGSFKLEVEPG---------------EIRKGEVIGIVGPNGIGKTTFVKMLAGVEEP---TEGKVEWDLTVAY--KPQYIKAEYEGTVYELLSKIDSSKLNSNFYKTELLKPLGII----DLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGRHGRALPPMGMREGMNRFLASVGITFRRDPDSGRPRANKEGSVKDREQKARGEYYYA------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80990 for 3115 contacts (-26.0/contact) +
2D Compatibility (PS) -42740 + (NN) -10317 + (LL) 11440
1D Compatibility (HY) -23600 + (ID) 6050
Total energy: -152257.0 ( -48.88 by residue)
QMean score : 0.338
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