Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTGASYPKYRFSVGKYTYGYQQFFYEGVNLKEIGAFCSIAQNVTI--TGMNHPTDHITTNPFIYYKSRGFINEDRADLIDEKKNGKVIIGNDVWIGTNVTILPSVTIGNGAIIGAGSVITKDIPDYAVVAGTPAKIIKYRFSEEEITLLNASQWWNWSDEAIKEHISEFSDKKEFFNTLKSISENKNHKL
3DHO Chain:A ((62-198))
--------------------------------KIGKFCSIGPGVTIIMNGANHRMDG-STYPFNLFGNGWEKHMPKLDQLPIK--GDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSIIR--------------
General information:
TITO was launched using:
RESULT:
Template:
3DHO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79795 for 882 contacts (-90.5/contact) +
2D Compatibility (PS) -14765 + (NN) -6977 + (LL) 2676
1D Compatibility (HY) -10800 + (ID) 3050
Total energy: -112711.0 ( -127.79 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_3DHO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DHO-query.scw
PDB file :
Tito_Scwrl_3DHO.pdb
: