Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITGIINLKKEAGMTSHDAVFKLRKILHTKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTESGKIYEGEITLGYATSTEDSSGEVISRTPLTQSDLSEDVVDHAMKSFTGPITQVPPMYSAVKVNGKKLYEYARSGEEVERPKRQITISEFRRTSPLYFEKGICRFSFYVSCSKGTYVRTLAVDLGIKLGYASHMSFLKRTSSAGLSITQSLTLEEINEKYKQEDFSFLLPIEYGVLDLPKVNLTEEDKVEISYGRRILLE--NEADTLAAFYENRVIAILEKRGNEFKPHKVLL |
| 2AB4 Chain:A ((1-272)) | MKHGILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFYKDLKKVFWVKMRLGLITETFDITGEVVEE---RECNVTEEEIREAIFSFVGEYDQVPPAYSAKKYKGERLYKLAREGKIINLPPKRVKIFKIWDVNIEGRD-----VSFRVEVSPGTYIRSLCMDIGYKLGCGATAVELVRESVGPHTIEESLN---VFEAAPEEIENRIIPLEKCLEWLPRVVVHQESTKMILNGSQIHLEMLKEWD---GFKKGEVVRVFNEEGRLLALAEAER |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89195 for 2086 contacts (-42.8/contact) +
2D Compatibility (PS) -28108 + (NN) -225 + (LL) 1096
1D Compatibility (HY) -18000 + (ID) 4950
Total energy: -139382.0 ( -66.82 by residue)
QMean score : 0.424
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