Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQSNHRYHGPLIEFEIEYSYIKIFPWIGLFISCIGLYASNFGDPLGFIKFIFSVCIFVNLVSIIISLFLKKYLIF
2GX5 Chain:A ((120-138))
-----LTTIVPIIGGGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAE--------------------
General information:
TITO was launched using:
RESULT:
Template:
2GX5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1517 for 65 contacts (-23.3/contact) +
2D Compatibility (PS) -1765 + (NN) 1781 + (LL) 1224
1D Compatibility (HY) -400 + (ID) 100
Total energy: -777.0 ( -11.95 by residue)
QMean score : 0.036
(partial model without unconserved sides chains):
PDB file :
Tito_2GX5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GX5-query.scw
PDB file :
Tito_Scwrl_2GX5.pdb
: