Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKDKYIVLCLLCAIATSNLSAVTVFAQDAQTILTQATTVTDQTSEKAGENSSAEATSASESVSSEATTVVPEASLPSTDLHAQPADSKTAPTETVIEGQTETNPTTSPDKQFLQQAIPKEKHRLGRKQIQANPKLQLLVSL |
2NOC Chain:A ((1-29)) | MKTGYKVMLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKKLEHHHHHH------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NOC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 737 for 63 contacts (11.7/contact) +
2D Compatibility (PS) -2981 + (NN) 1914 + (LL) 2876
1D Compatibility (HY) -800 + (ID) 350
Total energy: 1396.0 ( 22.16 by residue)
QMean score : 0.124
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