Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRLREYRIKASISQLALAKSVGVARQTINLIENNKYNPSLDLCIRLAECLQTDLNTLFWDSRHL
2LYQ Chain:A ((3-61))
INNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIFQWQPE-
General information:
TITO was launched using:
RESULT:
Template:
2LYQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35665 for 414 contacts (-86.1/contact) +
2D Compatibility (PS) -6231 + (NN) -850 + (LL) 156
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -50090.0 ( -120.99 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_2LYQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LYQ-query.scw
PDB file :
Tito_Scwrl_2LYQ.pdb
: