Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLIKYILSFENIIAIFFIVLFGLLLIRIEPVNNSVYSIISGIAIDKVIIVIISSFVIAIFSAFFIIDILEIIFHLKIDSLFLIAYLFFAISLGFGLLKVLTESQFSLLSAFIAFPLFLIFPKLFEKIVNNRKINQKDNKNQK
1Q90 Chain:L ((10-27))
----------------------------------------------------------------------------------LLIGALVFTLGIYLGLLKVVKLI---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8149 for 68 contacts (-119.8/contact) +
2D Compatibility (PS) -1778 + (NN) -980 + (LL) 12900
1D Compatibility (HY) -4000 + (ID) 400
Total energy: -2407.0 ( -35.40 by residue)
QMean score : 0.204
(partial model without unconserved sides chains):
PDB file :
Tito_1Q90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q90-query.scw
PDB file :
Tito_Scwrl_1Q90.pdb
: