Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKKDKKIEIQISDAQVTVNGTKVDGYQLVIGKKIVGQIAELDSKFAVIKGEQVSGFYKNLDQAMGNIIEEYNLNR
1AEL Chain:A ((59-110))
----DVVFELGVDFAYSLADGTELTGTWTMEGNKLVGKFKRVDNGKELIAVREISGNELIQTYTYEGVEAKRIFKK
General information:
TITO was launched using:
RESULT:
Template:
1AEL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3227 for 315 contacts (10.2/contact) +
2D Compatibility (PS) -5209 + (NN) 1211 + (LL) 308
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -3563.0 ( -11.31 by residue)
QMean score : 0.034
(partial model without unconserved sides chains):
PDB file :
Tito_1AEL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AEL-query.scw
PDB file :
Tito_Scwrl_1AEL.pdb
: