Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVNLDWDNLGFAYRKLPFRYISHFKDGK-WDDGKLTDDATLHISESSPALHYGQQAFEGLKAYRTKDGSIQLFRPDQNAERLQRTADRLLMPHVPTDKFIAAVKSVVRANEEFVPPYGTGATLYIRPLLIGVGDIIGVKPAEEYIFTVFAMPVGSYFKGGLTPTNFIVSKEYDRAAPNGTGAAKVGGNYAASLLPGKYAHEKQFSDVIYLDPATHTKIEEVGAANFF---GITKDNQFITP-LSPSILPSITKYSLLYLAKERFGMEAIEGDVFVDELDK------FTEAGACGTAAVISPIGGIQNG-DDFHVFYSETEVGPATRKLYDELVGIQFGDVEAPEGWIYKVD |
| 3HT5 Chain:A ((44-367)) | ------------------------YAEGRGWHNARVIPYGPIELDPSAIVLHYAQEVFEGLKAYRWADGSIVSFRADANAARLRSSARRLAIPELPDAVFIESLRQLIAVDKAWVPGAGGEEALYLRPFIFATEPGLGVRPATQYRYLLIASPAGAYFKGGIAPVSVWVSTEYVRACPGGTGAAKFGGNYAASLLAQAEAAENGCDQVVWLDAVERRYIEEMGGMNIFFVLGSGGSARLVTPELSGSLLPGITRDSLLQLAIDA-GFAVEERRIDIDEWQKKAAAGEITEVFACGTAAVITPVARVRHGASEFRI--ADGQPGEVTMALRDTLTGIQRGTFADTHGWMARLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116891 for 2511 contacts (-46.6/contact) +
2D Compatibility (PS) -33234 + (NN) -12561 + (LL) 1944
1D Compatibility (HY) -25600 + (ID) 6550
Total energy: -192892.0 ( -76.82 by residue)
QMean score : 0.474
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