Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGDNIKSLRRTHDLTQPEFAKIIGISRNSLSRYENGTSSVSTELIDRICQKFNVSYVDIVGEDKMMTPVEDYQLTIKIEVLKERGSAILSRLYRHQDEQGIAFDDESNPWILISDDVADLVNTKIYLVDTFEELERYNGYLDGIERMLNLANHQVVA
3DNV Chain:B ((13-67))
-LANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDAK-----------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DNV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24854 for 370 contacts (-67.2/contact) +
2D Compatibility (PS) -5804 + (NN) 332 + (LL) 7352
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -28174.0 ( -76.15 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_3DNV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DNV-query.scw
PDB file :
Tito_Scwrl_3DNV.pdb
: