Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYFRNYWYRFGAILFIILAVILLVFRPDWSMLHYLLYFNFMALLAHQFEEYQFPGGASPIINYVVYDEEELMDRFPGNTQSIMLVNTIAWLLYIASIAFPQAYWLGLGVMFFSLTQLLGHGFQMNIKLKTWYNPGLATTVFLLVPIACAYIYQASAEGMLTWGDWLGGFIMLIVCVLTSIIAPVQLLKDKKTNYIISPWQMDRFHKVINFVRIKK |
| 1MS9 Chain:A ((170-215)) | -------------------------------------------------------------------------------------------------------------------------------------------------PVSLKEFFPAEMEGMHT-NQFLGGAGVAIVASNGNLVYPVQVTNKKKQVFSKIFYSEDEGKTWKFGKGRSA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1MS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -15767 for 195 contacts (-80.9/contact) +
2D Compatibility (PS) -5014 + (NN) 5 + (LL) 13212
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -10364.0 ( -53.15 by residue)
QMean score : -0.379
|
|
|