Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPL-VAENQVTIKEERVLEWLSKGAQPSDTVRNLLSKAGVMTKFHDQKFSK
1IBK Chain:P ((2-80))
--VKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVFRQE-------
General information:
TITO was launched using:
RESULT:
Template:
1IBK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44361 for 535 contacts (-82.9/contact) +
2D Compatibility (PS) -7948 + (NN) -938 + (LL) 752
1D Compatibility (HY) -5200 + (ID) 2050
Total energy: -59745.0 ( -111.67 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_1IBK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IBK-query.scw
PDB file :
Tito_Scwrl_1IBK.pdb
: