Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRYLTAGESHGPSLTAIIEGIPAGLKLSAKDINEDLKRRQGGYGRGNRMKIETDQVIISSGVRHGKTLGSPITLTVTNKDHSKWLDIMSVEDIEERLKQKRRIKHP-RPGHADLVGGIKYRFDDLRNALERSSARETTMRVAIGAIAKRILKEIGIEIANHIVVFGGKEITVPDKLTVQQIKVLSSQSQVAIVNPSFEQEIKDYIDSVKKAGDTIGGV-------IETIVGGVPVGLGSYVHWDRKLDAKIAQAVVSINAFKGVEFGLGFKSGFLKGSQVMDSISWTKDQGYIRQSNNLGGFEGGMTNGEPIIVRGVMKPIPTLYKPLMSVDIDTHEPYRATVERSDPTALPAAGVVMEAVVATVLVTEVLEKFSSDNMYELKEAVKLYRNYVNHF |
1UMF Chain:A ((8-357)) | LRLTTFGESHGDVIGGVLDGMPSGIKIDYALLENEMKRRQGGRNVFITPRKEDDKVEITSGVFEDFSTGTPIGFLIHNQ--------------RARSKDYDNIKNLFRPSHADFTYFHKYGIRDFRGG-GRSSARESAIRVAAGAFAKMLLREIGIVCESGIIEIGG--IKAKNYDFNHALK-----SEIFALDEEQEEAQKTAIQNAIKNHDSIGGVALIRARSIKT-NQKLPIGLGQGLYA--KLDAKIAEAMMGLNGVKAVEIGKGVESSLLKGSEYND---LMDQKGFL--SNRSGGVLGGMSNGEEIIVRVHFKPTPSIFQPQRTIDINGNECECLLKGRHDPCIAIRGSVVCESLLALVLADMVLLNLTSKIEYLKTIYNEN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100246 for 2645 contacts (-37.9/contact) +
2D Compatibility (PS) -36859 + (NN) -14218 + (LL) 3464
1D Compatibility (HY) -18400 + (ID) 6750
Total energy: -173009.0 ( -65.41 by residue)
QMean score : 0.410
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