Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQVEVDLPNHSYHIKIEEGCFSEAGDWVSHLWQKQMITIITDSNVEILYGESLVNQLKKQGFTVH------VFSFAAGEASKTLEVANRIYGFLAKHHMT--RSDGIIALGGGVVGDLAAFVASTYMRGIHFLQIPTSLTAQVDSSIGGKTGVNTSFAKNMVGTFAQPDGVLIDPVTLKTLGNRELVEGMGEVIKYGLIDDIKLWHILEEMDGTIDSILDSAL---------------AIIYHSCQVKRKHVLADQYDKGLRMHLNFGHTIGHAIEVHAGYGEIMHGEAVAIGMIQLSRVAERKNLMPRGISQDIYNMCL-KFGLPVHYAE-----------WDKDVLFDILSHDKKASGQFIKIVILPQLGSATVHQIPLEEMRDYLEK
1NR5 Chain:A ((41-373))--------------------------------------LVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARILASARHKAYVVSADEREGGLRNLLNWGHSIGHAIEAIL-TPQILHGECVAIGMVKEAELARHLGIL-KGVAVSRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVDQLMFNMALDKKNDGPKKKIVLLSAIGTPYETRASVVANEDIRVV


General information:
TITO was launched using:
RESULT:

Template: 1NR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163824 for 2412 contacts (-67.9/contact) +
2D Compatibility (PS) -30953 + (NN) -5391 + (LL) 2668
1D Compatibility (HY) -20800 + (ID) 5850
Total energy: -224150.0 ( -92.93 by residue)
QMean score : 0.398

(partial model without unconserved sides chains):
PDB file : Tito_1NR5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NR5-query.scw
PDB file : Tito_Scwrl_1NR5.pdb: