Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGGKFQKNLKKSVVLNRWMNVGLILLFLVGLLITSYPFISNWYYNIKANNQVTNFDNQTQKLNAKEINRRFELAKAYNRTLDPSR---LSDPYTEKEKKGIAEYAHMLEITEMIGYIDIPSIKQKLPIYAGTTSSVLEKGAGHLEGTSLPIGGKSSHTVITAHRGLPKAKLFTDLDKLKKGKIFYIHNIKEVLAYKVDQISVVKPDNFSKLLVVKGKDYATLLTCTPYSINSHRLLVRGHRIKYVPPVKEKNYLMKELQTHYKLYFLLSILVILILVALLLYLKRKFKERKRKGNQK |
3RBK Chain:A ((17-218)) | ---------------------------------------------------INAFKEAVTKIDRVEINRRLELAYAYNASIAGAKYPALKDPYSAEQ---VVEYARMLEVKEQIGHVIIPRINQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHRGLPTAKLFTNLDKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYVEKT------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -102073 for 1508 contacts (-67.7/contact) +
2D Compatibility (PS) -20135 + (NN) -5317 + (LL) 9052
1D Compatibility (HY) -20800 + (ID) 5300
Total energy: -144573.0 ( -95.87 by residue)
QMean score : 0.492
|
|
|