Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKNINKKTKKKKSNLPFIILFLIGLSILLYPVVSRFYYTIESNNQTQDFERAAKKLSQKEINRRMTLAQAYNDSLNNVH--LEDPYEKKRIQKGVAEYARMLEVSEKIGTISVPKIGQKLPIFAGSSQEVLSKGAGHLEGTSLPIGGNSTHTVITAHSGIPDKELFSNLKKLKKGDKFYIQNIKETIAYQVDQIKVVTPDNFSDLLVVPGHDYATLLTCTPIMVNTHRLLVRGHRIPYKGLIDEKLMKEGHLNTIYRYLFYISLVIIAWLLWLIKRQRQKNRLASVRKGIES |
| 3TBE Chain:A ((20-214)) | --------------------------------------------------FKEAVTKIDRVEINRRLELAYAYNASIAG--PALKDPYS--------VEYARMLEVKEQIGHVIIPRINQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHRGLPTAKLFTNLDKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYVEKTVQKD---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TBE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77099 for 1432 contacts (-53.8/contact) +
2D Compatibility (PS) -19500 + (NN) -9638 + (LL) 9412
1D Compatibility (HY) -22000 + (ID) 5400
Total energy: -124225.0 ( -86.75 by residue)
QMean score : 0.495
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