Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENFLTHAKEGYYNGLSFHRVIKDFMIQSGDPNGDGTGGKSIWNSKDKKKDSGNGFVNEISPYL-YNIRGSLAMANAGA---DTNGSQFFINQSQQDHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVISGMETVDKIASVEVTKSDQPKEKITITSIKVIKDYKFK |
2POE Chain:A ((19-173)) | -----------------------------------------------------------------------------VRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGESIY---------GRYFDDEIYPELKYDRRGILSMASKGAKKPNTNGSQFFITYSSL------------------------PQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDIVIHSNP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2POE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55837 for 1184 contacts (-47.2/contact) +
2D Compatibility (PS) -15970 + (NN) -7349 + (LL) 7104
1D Compatibility (HY) -12800 + (ID) 3500
Total energy: -88352.0 ( -74.62 by residue)
QMean score : 0.579
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