Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKTYHFIGIKGSGMSALALMLHQMGHNVQGSDVDKYYFTQRGLEQAGVTILP-FSPNNISE---DLEIIAGNAFRPDNNEELAYVIEKGYHFKRYHEFLGD-FMRQFTSLGVAGAHGKTSTTGLLAHVLKNI-TDTSFLIG------------DGTGRGSANAN--YFVFEADEYE-------RHFMPYHPEYSIITNIDFDHPDYFTGLEDVFNAFNDYAKQV-QKGLFIY-GEDSKLHEITSKA---PIYYYGFEDSNDFIAKDITRTVNGSDFKVFYNQEEIGQFHVPAYGKHNILNATAVIANLYIMGIDMALVAEHLKTFSGVKRRFTEKIIDDTVIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDDFAHALSQADSVYLAQIYGSAREVDNGEVKVEDLAAKIVKHSDLVTVENVSPLLNHDNAVYVFMGAGDIQLYERSFEELLANLTKNTQ |
| 3EAG Chain:A ((20-326)) | -----------------LAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKR--GMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPNSQSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHYLVRTVPSEGLIVCNGRQQSLQDTLDKGCWTPVEKFGTE--HGWQAGEAN--ADGS-FDVLLDGKTAGRVKWDLMGRHNRMNALAVIAAARHVGVDIQTACEALGAFKNVKR------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179991 for 2158 contacts (-83.4/contact) +
2D Compatibility (PS) -30305 + (NN) -17789 + (LL) 12088
1D Compatibility (HY) -18800 + (ID) 4450
Total energy: -239247.0 ( -110.87 by residue)
QMean score : 0.446
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