Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRCPKCGYNKSSVVDSRQAEEGTTIRRRRECEKCGNRFTTFERLEELPLLVIKKDGTREQFSRDKILNGIIQSAQKRPVSSEDIENCILRIERKIRSEYEDEVSSITIGNLVMDELAELDEITYVRFASVYKSFKDVDEIEELLQQITKRVRSKKSGSV
2HEK Chain:A ((97-202))
-------------------------------------------------VLLPRERSHEDFTERVIKETEIYEILKQDYSHEDIERLVRITLGKPEDEEEKLLSEIITGEFGSDRMDYLRRDAY--FCGVSYGFFDYDRLISTLRVYENKVVVDESGLR
General information:
TITO was launched using:
RESULT:
Template:
2HEK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2111 for 583 contacts (-3.6/contact) +
2D Compatibility (PS) -11123 + (NN) -117 + (LL) 3272
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: -16279.0 ( -27.92 by residue)
QMean score : 0.219
(partial model without unconserved sides chains):
PDB file :
Tito_2HEK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HEK-query.scw
PDB file :
Tito_Scwrl_2HEK.pdb
: