Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTSKQRAFLKSEAHSMKPIIQIGKNGLNDQIKTSVRNALDARELIKVTLLQNTDEDIHDVAEVLEDEIGCDTVLK---IGRILILYKESARKENRKISVKVKAVKSN |
3LYV Chain:A ((3-50)) | --------------------------------------------VVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDSEDGATNILYRREDGNLGLIEAKLE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -267 for 190 contacts (-1.4/contact) +
2D Compatibility (PS) -4390 + (NN) 1382 + (LL) 3616
1D Compatibility (HY) 1200 + (ID) 150
Total energy: 1391.0 ( 7.32 by residue)
QMean score : 0.107
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