Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METKINNSQKNRYKFVFGDKPLTLTTDKDNLFMEEIERVA--TEKYEAIKEKLPNADNETIAILMAINALSVQLSREIDIEKMEDELNKLRSKTISDIKEKVSED
3C7N Chain:B ((498-531))
------------------ENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAF-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3C7N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1157 for 98 contacts (11.8/contact) +
2D Compatibility (PS) -3447 + (NN) -2379 + (LL) 4348
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -2271.0 ( -23.17 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_3C7N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C7N-query.scw
PDB file :
Tito_Scwrl_3C7N.pdb
: