Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTTKVFSVLSLSVAAFMMTACQSNHSTKKADMSPDKVEQKTKFKNISLSSNKLLAKENTMSVLWYQNSAEAKALYLQGYNVAKMKLDDWLQKPSEKPYSIILDLDETVLDNSPYQAKNIKDGSSFTPESWDKWVQKKSAKAVAGAKAFLKYANEKGIKIYYVSDRTDA-QVDATKENLEKEGIPVQGKDHLLFLKKGMKSKESRRQAVQKDTNLIMLF-GDNLVDFADFSKSS-STDREQLLTKLQSEFGSKFIVFPNPMYGSWESAIYQGKH-LDVQKQLKERQKMLHSYD |
3OCU Chain:A ((12-252)) | --------------------------------------------------ANMQLQQQAVLGLNWMQDSGEYKALAYQAYNAAKVAFDH-AKVAKGKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGV-EESAFYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNANYGGWEGGLAEGYFKKDTQGQIKARLDAVQAWD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -7628 for 1796 contacts (-4.2/contact) +
2D Compatibility (PS) -25711 + (NN) -12786 + (LL) 3828
1D Compatibility (HY) -12400 + (ID) 3900
Total energy: -58597.0 ( -32.63 by residue)
QMean score : 0.420
|
|
|