Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLKQAFIENDSIRLKLSASDWKEAIKLSIDPLIESGAVDAEYYDAIIESTEEFGPYYILMPGMAMPHARPEAGVKRDAFSLITLTEPVVFP--DGKEVSVLLALAATSSAIHTSVAIPQIIALFELENSI-QRLTECQEAKEVLAMVEESKNSPYLEGLDLES
1A6J Chain:A ((51-157))
-------------------------------------------FEAIL-TREKMGSTGI-GNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQPVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTE------------
General information:
TITO was launched using:
RESULT:
Template:
1A6J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51964 for 670 contacts (-77.6/contact) +
2D Compatibility (PS) -10930 + (NN) -1258 + (LL) 3960
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -67092.0 ( -100.14 by residue)
QMean score : 0.339
(partial model without unconserved sides chains):
PDB file :
Tito_1A6J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A6J-query.scw
PDB file :
Tito_Scwrl_1A6J.pdb
: