Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAIDKLVKASHLIDMNDIIREGNPTLRKVAEEVTFPLSEKEEILGEKMMQFLKHSQDPIMAEKLGLRGGVGLAAPQLDISKRIIAVLVPNVEDAQGNPPKEAYSLQEVMYNPKVVSHSVQDAALSDGEGCLSVDREVPGYVVRHARVTIEYFDKTGEKHRLKLKGYNSIVVQHEIDHIDGIMFYDRINEKNPFAVKEGLLILE
2OS1 Chain:A ((1-187))
------------MITMKDIIREGNPTLRAVAEEVPVPITEEDRQLGEDMLTFLKNSQDPVKAEELQLRGGVGLAAPQLDISKRIIAVHVP--------------SLSTVMYNPKILSHSVQDVCLGEGEGCLSVDRDVPGYVVRHNKITVSYFDMAGEKHKVRLKNYEAIVVQHEIDHINGIMFYDHINKENPFALKEGVLVIE
General information:
TITO was launched using:
RESULT:
Template:
2OS1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87858 for 1404 contacts (-62.6/contact) +
2D Compatibility (PS) -18752 + (NN) -4437 + (LL) 1384
1D Compatibility (HY) -24400 + (ID) 6350
Total energy: -140413.0 ( -100.01 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_2OS1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OS1-query.scw
PDB file :
Tito_Scwrl_2OS1.pdb
: