Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRIRKSLIFVLGVVTLICLCACTKQSQQKNGLSVVTSFYPVYSITKAVSGDLNDIKMI-RSQSGIHGFEPSSSDVAAIYDADLFLYHSHTLEAWARRLEPSLHHSKVSVIEASKGMTLDKVHGLEDVEAEKG--VDESTLYDPHTWNDPVKVSEEAQLIATQLAKKDPKNAKVYQKNADQFSDKAMAIAEKYKPKFK--AAKSKYFVTSHTAFSYLAKRYGLTQLGIAGVSTEQEPSAKKLAEIQEFVKTYKVKTIFVEEGVSPKLAQAVASATRVK------IASLSPLEA-VPKNNKDYLENLETNLKVLVKSLNQ |
| 3UJP Chain:A ((34-299)) | ----------------------------------VLTTFTVLADMVQNVAGDKLVVESITRIGAEIHGYEPTPSDIVKAQDADLILYNGMNLERWFEQFLGNVKDVPSVVL----------TEGIEPIPIADGPYTDKP---NPHAWMSPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQATGARFGGNLYVDSLSTEEGPVPT----FLDLLEYDARVITNGLLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85766 for 2064 contacts (-41.6/contact) +
2D Compatibility (PS) -27461 + (NN) -9560 + (LL) 3816
1D Compatibility (HY) -16400 + (ID) 4250
Total energy: -139621.0 ( -67.65 by residue)
QMean score : 0.504
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