Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTVSDVSLRFSDRKLFDEVNINFTAGNTYGLIGANGAGKSTFLKILAGDIEPTTGHIALGPDERLSVLRQNHFDYEDERVIDVVIMGNETLYSIMKEKDAIYMKEDFSDEDGVRAAELEGEFAELGGWEAESEASQLLQNLNISEELHYQNMSELANGDKVKVLLAKALFGKPDVLLLDEPTNGLDIQSITWLEDFLIDFEN---TVIVVSHDRHFLNKVCTHMADLDFGKIKLFVGNYDFWKESSELAARLQADRNAKAEEKIKQLQEFVARFSANASKSKQATSRKKMLDKIELEEIVPSSRKYP-----FVNFKAEREMGNDLLTVENLSVTIDGEKILDNISFILRPGDKTALIGQNDIQTTALIRALMGDIE-YEGTIKWGVTTSRSYLPKDNSRDFASGESILEWLRQFASKEEDDNTFLRGFLGRMLFSGDEVNKSVNVLSGGEKVRVMLSKLMLLKSNVLVLDDPTNHLDLESISSLNDGLKDFKE----SIIFASHDHEFIQTLANHIIVLSKNGVIDRIDETYDEFLENTEVQAKVAQLWK |
| 3BK7 Chain:A ((117-545)) | --------------------------GMVVGIVGPNGTGKTTAVKILAGQLIPNLCEDNDSWDNVIRAFRGNELQNYFER------LKNGEIRPVVKPQYVDLLPKAVKG----KVRELLKKVDEVGKFEEVVKELELENVLD--RELH-----QLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLD----YLSDV----IHVVYGEPGVYG----IFSKPKGTRNGINEFLQGYLKDENVRFRPYEIRFTKLSER---VD-VERETLV----EYPRLVKDYGSFKLEVEPGE------------------------IRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLTVA--YKPQYIKAEYEG--TVYELLSKIDSSKLNSN-FYKTELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGRHGRALPPMGMREGMNRFLASVGITF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87268 for 3281 contacts (-26.6/contact) +
2D Compatibility (PS) -44318 + (NN) -12412 + (LL) 6120
1D Compatibility (HY) -29600 + (ID) 5800
Total energy: -173278.0 ( -52.81 by residue)
QMean score : 0.308
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