Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYVNGRYMEEKDAVLSPFDHGFLYGIGVFETFRLYEG----CPFLLDWHIERLERALKDLQIEYTVSKHEILEMLDKLLKLNDIKD---------GNARVRLNISAGISDKGFVAQTYDKPTVLCFVNQLKPESLPLQKEGKVLSIRRNTPEG--SFRLKSHHYLNNMYAKREIGNDPRVEGIFLTEDGAVAEGIISNVFWRKGRCIYTPSLDTGILDGVTRRFIIENAKDIGLELKTGRYELEALLTADEAWMTNSVLEIIPFTKIEEVNYG-SQSGEATSALQLLYKKEIKNMIHEKGGRAWRSTQ |
| 1I1M Chain:A ((9-289)) | -IWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIA-------AFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAF-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111325 for 2064 contacts (-53.9/contact) +
2D Compatibility (PS) -28171 + (NN) -5523 + (LL) 1716
1D Compatibility (HY) -15200 + (ID) 3650
Total energy: -162153.0 ( -78.56 by residue)
QMean score : 0.447
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