Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKRIVQAFFIIFGGVVGIFLIPELFVLLNIQDIPLITNAYTSAAIGAIIFFLISIWGTEYVVNWVKWIEDSLLKAPVPDLLFGSLGLVFGLIIAYLIVNVIPLDNIPYRIFSTIIPVFLAFFLGYLGFQVGFKKKDELISLFSISARMQKKKGTADEEHEVQDKKLKILDTSVIIDGRIADICQTGFLEGVIVIPQFVLEELQHIADSSDVLKRNRGRRGLDILNRIQKELD--IEVEIYEGDFEDIQEVDSKLVKLAKLTSGVVVTNDFNLNKVCELQKVAVLNINDLANAVKPVVLPGEEMNVQVIKDGKEHNQGVAYLDDGTMIVVEEGRNYIGKHIDVLVTSVLQTAAGRMIFAKPKLLEKAL |
2LCQ Chain:A ((5-129)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------MLRNLKKTLVLDSSVFIQGID----------IEGYTTPSVVEEIKDRESKI-FLESLISAGKVKIAEPSKESIDRIIQVAKETGEVNELSKADIEVLALAYELKGEIFSDDYNVQNIASLLGLRFRTLKRGIKKVI------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LCQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30891 for 896 contacts (-34.5/contact) +
2D Compatibility (PS) -13297 + (NN) -4708 + (LL) 20212
1D Compatibility (HY) -5200 + (ID) 1250
Total energy: -35134.0 ( -39.21 by residue)
QMean score : 0.404
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