Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQQHDYVIGKNAVIETLKSDRKLYKLWMAENTVKGQAQQVIELAKKQGITIQYVPRKKLDQMVTGQHQGVVAQVAAYEYAELDDLYKAAEEKNEQPFFLILDE--LEDPHNLGSIMRTADAVGAHGIVIPKRRAVGL---TTTVAKASTGAIEHIPVARVTNLARTLEEMKERGIWVVGTDASAREDFRNMDGNMPLALVIGSEGKGMGRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRKRNPVGE |
1IPA Chain:A ((108-256)) | ------------------------------------------------------------------------------------------EEYRPSPDALILVAVGLEKPGNLGAVLRSADAAGAEAVLV----AGGVDLYSPQVIRNSTGVVFSLRTLAASE-SEVLDWIKQHNLPLVATTPHAEALYWEANLRPPVAIAVGPEHEGLRAAWLEAAQTQVRIPMQGQADSLNVSVSAALLLYE---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86516 for 1125 contacts (-76.9/contact) +
2D Compatibility (PS) -15789 + (NN) -4419 + (LL) 8884
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -107840.0 ( -95.86 by residue)
QMean score : 0.534
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