Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQQHDYVIGKNAVIETLKSDRKLYKLWMAENTVKGQAQQVIELAKKQGITIQYVPRKKLDQMVTGQHQGVVAQVAAYEYAELDDLYKAAEEKNEQPFFLILDE--LEDPHNLGSIMRTADAVGAHGIVIPKRRAVGL---TTTVAKASTGAIEHIPVARVTNLARTLEEMKERGIWVVGTDASAREDFRNMDGNMPLALVIGSEGKGMGRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRKRNPVGE
1IPA Chain:A ((108-256))------------------------------------------------------------------------------------------EEYRPSPDALILVAVGLEKPGNLGAVLRSADAAGAEAVLV----AGGVDLYSPQVIRNSTGVVFSLRTLAASE-SEVLDWIKQHNLPLVATTPHAEALYWEANLRPPVAIAVGPEHEGLRAAWLEAAQTQVRIPMQGQADSLNVSVSAALLLYE----------


General information:
TITO was launched using:
RESULT:

Template: 1IPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86516 for 1125 contacts (-76.9/contact) +
2D Compatibility (PS) -15789 + (NN) -4419 + (LL) 8884
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -107840.0 ( -95.86 by residue)
QMean score : 0.534

(partial model without unconserved sides chains):
PDB file : Tito_1IPA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1IPA-query.scw
PDB file : Tito_Scwrl_1IPA.pdb: