Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIMKFFKDVGKEMKKVSWPKGKELTRYTITVISTVIFFVIFFALLDTGISQLIRLIVE
5EUL Chain:E ((2-57))
QRVTNFFKEVVRELKKVSWPNRKELVNYTAVVLATVAFFTVFFAVIDLGISQLIRL---
General information:
TITO was launched using:
RESULT:
Template:
5EUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6595 for 212 contacts (-31.1/contact) +
2D Compatibility (PS) -5700 + (NN) -1041 + (LL) 500
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: -21736.0 ( -102.53 by residue)
QMean score : 0.295
(partial model without unconserved sides chains):
PDB file :
Tito_5EUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5EUL-query.scw
PDB file :
Tito_Scwrl_5EUL.pdb
: