Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALNIEEIIASVKEATVLELNDLVKAIEEEFGVTAAAPVAVAGGAAAGGAA---------------EEQSEFDLILAGAGS-QKIKVIKVVRE-ITGLGLKEAKELVDNTPKPLKEGIAKEEAEELKAKLEEVGASVEVK
2FTC Chain:E ((3-134))
----IQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPM-GGMVPGAAPAPTAPEAAEEDVPKQKERTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALEAVGGTV---
General information:
TITO was launched using:
RESULT:
Template:
2FTC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 684715 for 5778 contacts (118.5/contact) +
2D Compatibility (PS) -10670 + (NN) 2439 + (LL) 992
1D Compatibility (HY) -1600 + (ID) 650
Total energy: 675226.0 ( 116.86 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_2FTC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FTC-query.scw
PDB file :
Tito_Scwrl_2FTC.pdb
: