Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKSMIAKQQRTPKFKVQEYTRCERCGRPHSVIRKFKLCRICFRELAYKGQIPGVKKASW
1IBM Chain:N ((2-61))
-ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW
General information:
TITO was launched using:
RESULT:
Template:
1IBM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29404 for 322 contacts (-91.3/contact) +
2D Compatibility (PS) -6065 + (NN) -2426 + (LL) 208
1D Compatibility (HY) -7200 + (ID) 2100
Total energy: -46987.0 ( -145.92 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1IBM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IBM-query.scw
PDB file :
Tito_Scwrl_1IBM.pdb
: