Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGQKAWVNIGKTEFILLLVVGILT-IINVLTADGEKRTFHSPKKKNINHLTLYDCVSPEVQNSINETGRVTNFF
4WFA Chain:R ((5-39))
-KGDNVKVIAGKDKGKEGKVIATLPKKDRVVV-EGVN--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4WFA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8416 for 159 contacts (-52.9/contact) +
2D Compatibility (PS) -3626 + (NN) 612 + (LL) 2236
1D Compatibility (HY) 2000 + (ID) 400
Total energy: -7594.0 ( -47.76 by residue)
QMean score : 0.154
(partial model without unconserved sides chains):
PDB file :
Tito_4WFA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WFA-query.scw
PDB file :
Tito_Scwrl_4WFA.pdb
: