Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVRPSVKPICEKCKVIRRKGKVMVIC-ENPKHKQKQG
1J0T Chain:A ((19-43))
-----KVVRVCEDCTNIFRLPGLDGMCRNR--------
General information:
TITO was launched using:
RESULT:
Template:
1J0T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4080 for 108 contacts (-37.8/contact) +
2D Compatibility (PS) -2252 + (NN) 1387 + (LL) 588
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -6707.0 ( -62.10 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_1J0T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J0T-query.scw
PDB file :
Tito_Scwrl_1J0T.pdb
: