Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKENNYHHLAQKILELCGGKSNISSYTHCMTRLRITPYDESKADAQALRKLDGVLGVVEAETLQIILGTGVVNHVTAAFSKLVSAEEGADVKEAAAKKKADINRKNATPFKLFLRKIASIFIPLIPALVASGLITGITKAIIQAGWLSADSQIAIILTVIGSGLFTYLGILVGINASKEFGGTPALGALAGI---LIINPEIAKISLFGEELLPGRGGLIGVLFAAIFIAYTEQFIRRFIPQSLDII-VTPTVSLLITGIVTYVVFMPLGGFISDAITSGLLSILDIGGIAAGFILGATFLPLVVTGLHQGLTPVHMELINSIGNDPLLPILAMGGAGQVGAAFAVFVKTKKTTLRKAIAGGLPSGLLGIGEPLIFGVTLPLGRPFLTACLGAGIGGAFQAYFQVATIAIGVSGLPLSFLVLPSQIILYIVGLFISYAAGFLLTYAFGYKDEMASQFD |
1NQZ Chain:A ((42-152)) | ---------------------------------------------------------------------------------------------------------------------------------------------------LTREADPRVLLTVRS------KGQIAFPGGSLDAGETPTQAALREAQEEVALDP--AAVTLLGE---------LDDVFTPVGFHVT-PVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVPL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80109 for 613 contacts (-130.7/contact) +
2D Compatibility (PS) -10844 + (NN) -3439 + (LL) 24084
1D Compatibility (HY) -4800 + (ID) 1500
Total energy: -76608.0 ( -124.97 by residue)
QMean score : 0.087
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