Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSCPEQIVQLMHMHLDGDILPKDEHVLNEHLETCEKCRKHFYEMEKSIALVRSTSHVEAPADFTANVMAKLPKEKKRASVKRWFRTHPVIAAAAVFIILMGGGFFNSWHNDHNFSVSKQPNLVV------HNHTVTVPEGETVKGDVTVKNGKLIIKGKID----GDVTVVNGEKYMASAGQVTGQIEEINQLFDWTWYKMKSAGKSVLDAFNPNGEE |
1ITX Chain:A ((50-134)) | -----------------------------------------------------------------------------------------------------------WNGIHGNPDPSGPNPVTWTCQNEKSQTINVPNGTIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLK------QTNPNLKTIISVGGWTW-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ITX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17680 for 358 contacts (49.4/contact) +
2D Compatibility (PS) -8039 + (NN) -1303 + (LL) 9832
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: 15020.0 ( 41.96 by residue)
QMean score : 0.081
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