Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METNKPTLYWSLLMFKDWNFYIASTLKGLVFVGSQNKPIEELFEWARKRFPGSLLVEDDDKLEPYAVEITQYLEGKRKNFTVPVEYAG-TQFQLAVWNALCEIPYGQTKSYSDIANDINKPAAVRAVGAAIGANPVLITVPCHRVIGKNGSLTGYRGGFEMKTLLLDLEKRASSEMDVPH
1WRJ Chain:A ((38-146))
---------------------------------------------------------DNDYFTDFFYKLDLYFEGKKVDLTEPVDFKPFNEFRIRVFKEVMRIKWGEVRTYKQVADAVK--TSPRAVGTALSKNNVLLIIPCHRVIGEK-SLGGYSRGVELKRKLLELE-----------
General information:
TITO was launched using:
RESULT:
Template:
1WRJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65203 for 737 contacts (-88.5/contact) +
2D Compatibility (PS) -11497 + (NN) -5330 + (LL) 4696
1D Compatibility (HY) -13200 + (ID) 2050
Total energy: -92584.0 ( -125.62 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_1WRJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WRJ-query.scw
PDB file :
Tito_Scwrl_1WRJ.pdb
: