Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVSLSLSSLLTLFFIMLMASGISGLLFLHPRVPLSFVRIHIGILALPLLVSLLILAN--S--------G---VSGNVGPWHLDSLACLMTFFVLAIGFIIQRFSVRYLMGDRSYRKYFTLFTFTTGAASMTWLSGDLRLMVLFWGATLVGLTLLIRLNSAWQVASEAAKISGRLFLLSWFSLFFAMMWLFHATGQ--WQLSLVVTNESLAGLGEWERTGIQLLIVLAVIIPAAQWPFQRWLVESIVAP-TPVSAIMHAGLVNAGGIILTRFSPLFHGG---IASIILLLLASISVLIGTGISLVQVDYKRQLVGSTIGQMGFMLIQCALGA---YIAAIIHLILHGLFKATLFLQAGSAVGRHEVST-RTNERTSYLWVMAGRILSLVIGVAFWLTAPGDGYHLISALILGWSLSVSWDQLVAFGEGRIGRIAGLTVLGGAALVYFIIHHLFYKWLHTTIFQSVQPPMSAVMIVVCLLLFGSALGTWVARHRSSVFFAVLYLWLVRLGEAKPKSVESHPDYLKQYIS |
| 4HE8 Chain:M ((1-345)) | ---------MVVLAVLLPVVFGALLLLG--L--P---RALGVLGAGLSFLLNLYLFLTHPGGVAHAFQAPLLPGAGVYWAFGLDGLSALFFLTIALTVFLGALVA-------RVEGRFLGLALLMEGLLLGLFAARDLLVFYVFFEAALIPALLMLYLYGG-EGRTRALYTFVLFTLVGSLPMLAAVLGARLLSGSPTFLLEDLLAH----PLQEEAAFWVFLGFALAFAIKTPLFPLHAWLPPFHQENHPSGLADALGTLYKVGVFAFFRFAIPLAPEGFAQAQGLLLFLAALSALYGAWVAFAAKDFKTLLAYAGLSHMGVAALGVFSGTPEGAMGGLYLLAASGVYTGGLFLLAGRLYERTGTLEIGRYR----------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -362338 for 2870 contacts (-126.3/contact) +
2D Compatibility (PS) -33082 + (NN) -14869 + (LL) 15984
1D Compatibility (HY) -20800 + (ID) 3250
Total energy: -418355.0 ( -145.77 by residue)
QMean score : 0.354
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