Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEPIEVFKALSNESRLQILQWLKEPDRHFAPHEGIDMNTIGVCVSQITDKLKMTQSTASQYLTILLRAGLIKAERIGKYTYYKRDEEAIGKLADFLKTEI
2M30 Chain:A ((18-84))
----EIFKALGDYNRIRIMELLSVSE---------------ASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDD--------------
General information:
TITO was launched using:
RESULT:
Template:
2M30.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43497 for 421 contacts (-103.3/contact) +
2D Compatibility (PS) -7063 + (NN) -1001 + (LL) 2292
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -55619.0 ( -132.11 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_2M30.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M30-query.scw
PDB file :
Tito_Scwrl_2M30.pdb
: