Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFLKALPRRAEVQYDCLDRTLETQENVNLNIRVNVKEVATWGVNTCIISLKGLDNADDRFVLPEV-NTALA----LFPLSIAADCLLMLPCISVVMSISSVMKSVTVE
3KNZ Chain:A ((292-340))
-------------------------------------ILGEWTPSIYRIGPQVE-NNGLNLNFPFVNDEDFAVFEYIIPLQMLCAIL----------------------
General information:
TITO was launched using:
RESULT:
Template:
3KNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13676 for 180 contacts (-76.0/contact) +
2D Compatibility (PS) -4625 + (NN) -584 + (LL) 5564
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -17371.0 ( -96.51 by residue)
QMean score : 0.066
(partial model without unconserved sides chains):
PDB file :
Tito_3KNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KNZ-query.scw
PDB file :
Tito_Scwrl_3KNZ.pdb
: