Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRNQKEWESVSKKGLMKPGGTSIVKAAGCMGCWASKSIAMTRVCALPHPAMRAI
1CCH Chain:A ((2-21))
-------------------DGEALFKSKPCAACHSVDTK----------------
General information:
TITO was launched using:
RESULT:
Template:
1CCH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6432 for 71 contacts (-90.6/contact) +
2D Compatibility (PS) -2073 + (NN) 156 + (LL) 2876
1D Compatibility (HY) -400 + (ID) 200
Total energy: -6073.0 ( -85.54 by residue)
QMean score : -0.258
(partial model without unconserved sides chains):
PDB file :
Tito_1CCH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CCH-query.scw
PDB file :
Tito_Scwrl_1CCH.pdb
: