Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNSAHNKNETTFQRSMKSRHLFMLSLGGVIGTGLFLSSGYTIQQAGPAGTILAYLVGAGIVYLVMLCLGELSVAMPVTGAFHTYAAKYIGPGTGFTVAWLYWLTWTVALGSEFTAAGLLMQRWFPHTSVWMWSAVFALFIFLLNAFSVKFFAESEFWFSSIKVLAIVLFILLGGSAMFGIIPIKGGEAAPMLSNFTAEGGLFPNGFVPILMTMLSVNFAFSGTELIGIAAGESVDPDKTIPKAIKTTVWRLSLFFVGTIFVLSGLIPIQDAGVIKSPFVAVFDRVGVPYAADIMNFVI----LTAILSAANSGLYASSRMLWSLSKEKTLHPTFAK-----------LTSKGTPFNALVFSMIGGILSLLSSVFAPDTVYVVLVSISGFAVVVVWMGIAASQFMFRKRYIEAGNKVTDLKYRTPLYPFVPIAAFLLCLASVVGIAFDPNQRIALYCGVPFMAICYAIYYVKNRKSQPAADMTHSK
3GI8 Chain:C ((139-360))----------------------------------------------------------------------------------------------------------------------------------------------LNFFGSKAVGRAEFFIVLVALLILGLFIFAG------LITIHPSYVIPDLAPSAVSGMIFASAIFFL---------SYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAK---PFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFNM-EGVASITSAVFMVIYLFVIL------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GI8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 510 -74827 -146.72 -361.48
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain C : 0.55

3D Compatibility (PKB) : -146.72
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.102

(partial model without unconserved sides chains):
PDB file : Tito_3GI8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GI8-query.scw
PDB file : Tito_Scwrl_3GI8.pdb: