Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAYDSRFDEWVQKLKEESFQNNTFDRRKFIQGAGKIAGLSLGLTIAQSVGAFEVNAAPNFSSYPFTLGVASGDPLSDSVVLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAKPSLAHSVHVEADGLEPNKVYYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHG-YY---TAYKHMAK-EKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAA--HAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRI--SSLPNGPDMQLYRHF--TY------GNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSS--TAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDFEKTSSKIFGAEFVGTSITSGGNGADKRADTDQILKENPHIQFFNDYRGYVRCTVTPHQWKADYRVMPFVTEPGAAISTRASFVYQKDQTGLRKVSSTTIQGGVKQSDEVEEDRFFSHNKAHEKQMIKKRAKITN
3TGH Chain:A ((2-305))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFI-DGVKG----------------LNDPAWKNLYEDVY-----SEEKGDMYMPFFTVLGTRDWTGNYNAQLL--------K------GQG----------DATNYPKWIMPNYWYHYFTHFTVSHKDLA-AAFIFIDTWVLSSNF----------------PYKKIHEKAWNDLKSQLSVAKKIADFIIVVGDQPIYSSGYS------------RGSSYLAYYLLPLLKDAEV--DLYISGHDNNMEVIED--N--------DMAHITCGS-GSMSQGKS--------GMKNSKSLFFSSDIGFCVHELSNNGIVTKFVSSKKG-------EVIYTHKLN-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3TGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1617 -134643 -83.27 -515.87
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -83.27
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.351

(partial model without unconserved sides chains):
PDB file : Tito_3TGH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TGH-query.scw
PDB file : Tito_Scwrl_3TGH.pdb: