Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVNKQLKKKAQEIGNVPTHYELEIEDYDQKQKKYGQAYFIWKDPKDPEKHITVELRNDGALLTFSTTVHSETDKKLPDAELKLTALQFAAANHPGTFMNFHFQGKEERGQHIRFVYTKMELGLPIPNSGFLIDMTRSGQIVHFLYYGEGHKAEVPTEFVAKEKVVSHYLNTMSFELMYDVIDGEQEPRLVYEPILPGYSYPADVDEIVPDQHIADERIENTAPLPPLQNKEEVDIFALLGFTSD--MQKVSERDFGEQIGSTWRRGAAPERKDLSIGSYFETRNKNTIKMKTDKRTGKLKAALSFMDWRNNLQCSTEECQEIALQFLYALYPRAAEFFRVNPVRIDERGR-VRNHFSVW-YKGVPLRFGAARIIVNPETGLIDAFMAPDIE--PEQLEAINHRPDVSAEEAKEAFLAAFDVK---LEWQPDFTAGSDQHCKLVYKPVY-------PSYIDAHIRKKKRL
5BOI Chain:A ((14-226))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAKQVARSFLNLKGNEQI-HIVKSG-KDADYEVYSLTI------------TDPKTNQETYMDITQKGGYPLWVLEDRD-IKKQNISLNDAMNKATKFLKDHRFE---SLVMAESA--QYDNMGVFTFVEQTESGVRIYPDSVKMKMSLEDGSVIGFSAKDFLLKHRTRD--IPKPKISKEQAKTKLNSNVKVMEERLAIITND----LNEEVLCYEFLGTIKNDTYRIFINADTGFEEK-


General information:
TITO was launched using:
RESULT:

Template: 5BOI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 879 -65129 -74.09 -330.60
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -74.09
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.334

(partial model without unconserved sides chains):
PDB file : Tito_5BOI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BOI-query.scw
PDB file : Tito_Scwrl_5BOI.pdb: