Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVRYQIEQLGDSAMMIRFGE-----EINEQVNGIVHAAAAYIEEQPFPGFIECIPAFTSLTVFYDMYEVYKHLPQGISSPFESVKRDVEERLAEIAEDYEVNRRIVEIPVCYGGEFGPD-------------------LEEVAKINQLSPEEVIDIHTNGEYVVYMLGFAPGFPFLGGMSKRIAAPR------KSSPRPSIPA-GSVGIAGLQTGVYPI-STPGGWQLIGKTPLALFRP--QENP---PTLLRAGDIVKFVRISEKDYHAYKEESN
3VA7 Chain:A ((842-1102))--------QAGDRYILVEYGELEFDLNICYRINRLIHQ----VERHQTVGIVEMSQGVRSVLIEFDGSKINQKALLKCLIAYESE--------IQFDKNWNVKSKIFKLPMAFEDSKTLDCVTRYRETIRSEAPWLPNNVDFIADVNDIDRNDVKNMLYSAKFMVLGLGDV----FLGSPCAVPLDPRHRYLGTKYNPSRTYTARGVVGIGGMYMCIYNAEGSPGGYQLVGRTITAWDKLVIGDHPIDHPWLLTPFDQVEFYPVTEEELEVIIEDND


General information:
TITO was launched using:
RESULT:

Template: 3VA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1015 -120584 -118.80 -558.26
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -118.80
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_3VA7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VA7-query.scw
PDB file : Tito_Scwrl_3VA7.pdb: